Detailed information for motif32

P-value:1e-20
ln P-value:-4.619e+01
Information content per bp:1.695
Number of target sequences with motif:303.0
Percentage of target sequences with motif:11.54%
Number of background sequences with motif:3057.1
Percentage of background sequences with motif:  6.59%
Average position of motif in targets:200.7 +/- 113.1bp
Average position of motif in background:197.1 +/- 118.6bp
Strand bias (log2 ratio + to - strand density):0.1
Multiplicity (# of sites on avg that occur together):  1.12
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

Tlx?/NPC-H3K4me1-ChIP-Seq/Homer

Match rank:  1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GGCTGGCTGCC-
CTGGCAGNCTGCCA
  

SMAD1..7,9.p2.SwissRegulon.nucfreq

Match rank:  2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GGCTGGCTGCC----
GGCTGTCTGCCCNNC
  

TLX1..3_NFIC{dimer}.p2.SwissRegulon.nucfreq

Match rank:  3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GGCTGGCTGCC-
TTGGCNTNCTGCCA
  

MA0119.1_TLX1::NFIC

Match rank:  4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGCTGGCTGCC-
TTGGCATGGTGCCA
  

NF1(CTF)/LNCAP-NF1-ChIP-Seq/Homer

Match rank:  5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGCTGGCTGCC--
CTTGGCANNNTGCCAA