Detailed information for motif17

P-value:1e-28
ln P-value:-6.452e+01
Information content per bp:1.711
Number of target sequences with motif:111.0
Percentage of target sequences with motif:4.23%
Number of background sequences with motif:556.4
Percentage of background sequences with motif:  1.20%
Average position of motif in targets:201.3 +/- 97.7bp
Average position of motif in background:202.2 +/- 120.3bp
Strand bias (log2 ratio + to - strand density):-0.3
Multiplicity (# of sites on avg that occur together):  1.00
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0050.1_IRF1

Match rank:  1
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:CTGGTTTCACTTT-
--GGTTTCACTTTC
  

IRF2_f1_HM09

Match rank:  2
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:CTGGTTTCACTTT--
-NNCTTTCACTTTCC
  

IRF1_si_HM09

Match rank:  3
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:CTGGTTTCACTTT-
--ACTTTCACTTTC
  

MA0051.1_IRF2

Match rank:  4
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---CTGGTTTCACTTT--
GTTTTGCTTTCACTTTCC
  

IRF1,2,7.p3.SwissRegulon.nucfreq

Match rank:  5
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---CTGGTTTCACTTT----
GTTTNGGTTTCGCTTTCCTT