Detailed information for motif16

P-value:1e-33
ln P-value:-7.641e+01
Information content per bp:1.666
Number of target sequences with motif:778.0
Percentage of target sequences with motif:29.63%
Number of background sequences with motif:9148.5
Percentage of background sequences with motif:  19.73%
Average position of motif in targets:207.1 +/- 107.3bp
Average position of motif in background:200.9 +/- 123.9bp
Strand bias (log2 ratio + to - strand density):0.2
Multiplicity (# of sites on avg that occur together):  1.19
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

SMAD3_f1_HM09

Match rank:  1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TGTGWCAGRC-
-GTGTCTGGCC
  

MA0288.1_CUP9

Match rank:  2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TGTGWCAGRC
AATGTGTCA---
  

Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match rank:  3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGTGWCAGRC-
AGGTGHCAGACA
  

SMRC1_f1_HM09

Match rank:  4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGTGWCAGRC
CTGAGTCAC--
  

JUNB_f1_HM09

Match rank:  5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TGTGWCAGRC
GATGAGTCAT--