Detailed information for motif4

P-value:1e-201
ln P-value:-4.644e+02
Information content per bp:1.590
Number of target sequences with motif:4188.0
Percentage of target sequences with motif:60.09%
Number of background sequences with motif:17960.1
Percentage of background sequences with motif:  42.00%
Average position of motif in targets:201.0 +/- 97.1bp
Average position of motif in background:198.4 +/- 120.3bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.38
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

PAX2.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.84
Offset:2
Orientation:forward strand
Alignment:YRHGTCAC--
--NGTCACGN
  

ATF3_f1_HM09

Match rank:  2
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-YRHGTCAC
TGGCGTCAC
  

MA0067.1_Pax2

Match rank:  3
Score:0.82
Offset:2
Orientation:forward strand
Alignment:YRHGTCAC--
--AGTCACGC
  

MAFG_si_HM09

Match rank:  4
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:YRHGTCAC-
--AGTCATN
  

CREB1.p2.SwissRegulon.nucfreq

Match rank:  5
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:YRHGTCAC----
NACGTCACCNNG