Detailed information for motif28

P-value:1e-40
ln P-value:-9.278e+01
Information content per bp:1.745
Number of target sequences with motif:319.0
Percentage of target sequences with motif:4.58%
Number of background sequences with motif:843.8
Percentage of background sequences with motif:  1.97%
Average position of motif in targets:179.9 +/- 113.6bp
Average position of motif in background:198.3 +/- 117.3bp
Strand bias (log2 ratio + to - strand density):-0.2
Multiplicity (# of sites on avg that occur together):  1.02
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

SPIB.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TTCCTCTKTCTG
TTCCTCT-----
  

SPIB_f1_HM09

Match rank:  2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TTCCTCTKTCTG
CTTCCTCTTTTT-
  

MA0081.1_SPIB

Match rank:  3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTCCTCTKTCTG
TTCCTCT-----
  

MA0205.1_Trl

Match rank:  4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TTCCTCTKTCTG
TTGCTCTCTC--
  

SPI1_si_HM09

Match rank:  5
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------TTCCTCTKTCTG
TTTCACTTCCTCTTTTN-