Detailed information for motif3

P-value:1e-110
ln P-value:-2.540e+02
Information content per bp:1.645
Number of target sequences with motif:733.0
Percentage of target sequences with motif:24.34%
Number of background sequences with motif:4733.8
Percentage of background sequences with motif:  10.13%
Average position of motif in targets:200.2 +/- 80.8bp
Average position of motif in background:199.2 +/- 115.6bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.13
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq/Homer

Match rank:  1
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-GGAAWTYCCM-
GGGAAATCCCCN
  

REL_do_HM09

Match rank:  2
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-GGAAWTYCCM-
NGGAAANCCCCN
  

MA0101.1_REL

Match rank:  3
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GGAAWTYCCM
GGAAANCCCC
  

MF0003.1_REL_class

Match rank:  4
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:GGAAWTYCCM
GGAAATCCCC
  

MA0107.1_RELA

Match rank:  5
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:GGAAWTYCCM
GGAAATTCCC