Detailed information for motif2

P-value:1e-193
ln P-value:-4.463e+02
Information content per bp:1.672
Number of target sequences with motif:793.0
Percentage of target sequences with motif:26.34%
Number of background sequences with motif:3796.2
Percentage of background sequences with motif:  8.13%
Average position of motif in targets:202.4 +/- 74.3bp
Average position of motif in background:198.9 +/- 118.3bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.15
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer

Match rank:  1
Score:0.99
Offset:0
Orientation:forward strand
Alignment:RTGAGTCAYB
VTGASTCABH
  

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  2
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-RTGAGTCAYB
GATGAGTCAT-
  

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer

Match rank:  3
Score:0.97
Offset:-2
Orientation:reverse strand
Alignment:--RTGAGTCAYB
NNATGAGTCATN
  

MA0099.1_Fos

Match rank:  4
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:RTGAGTCAYB
-TGACTCAC-
  

JUN_f1_HM09

Match rank:  5
Score:0.95
Offset:0
Orientation:forward strand
Alignment:RTGAGTCAYB
ATGAGTCAT-