Detailed information for motif4

P-value:1e-15
ln P-value:-3.511e+01
Information content per bp:1.767
Number of target sequences with motif:15.0
Percentage of target sequences with motif:5.88%
Number of background sequences with motif:126.8
Percentage of background sequences with motif:  0.26%
Average position of motif in targets:229.3 +/- 121.0bp
Average position of motif in background:220.9 +/- 119.7bp
Strand bias (log2 ratio + to - strand density):-0.2
Multiplicity (# of sites on avg that occur together):  1.00
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

PL0003.1_hlh-2::cnd-1

Match rank:  1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CAAAATATCTGT----
AGGAACAGCTGTCTAA
  

ZN238_f1_HM09

Match rank:  2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CAAAATATCTGT-
NCGAAACATCTGGA
  

PB0121.1_Foxj3_2

Match rank:  3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CAAAATATCTGT
AACACCAAAACAAAGGA
  

MA0091.1_TAL1::TCF3

Match rank:  4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAAAATATCTGT-
-CGACCATCTGTT
  

PL0006.1_hlh-2::lin-32

Match rank:  5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAAAATATCTGT----
AAGAACAGCTGTTCTC