Detailed information for motif6

P-value:1e-38
ln P-value:-8.840e+01
Information content per bp:1.526
Number of target sequences with motif:593.0
Percentage of target sequences with motif:33.52%
Number of background sequences with motif:9694.3
Percentage of background sequences with motif:  20.23%
Average position of motif in targets:193.1 +/- 108.7bp
Average position of motif in background:198.9 +/- 120.7bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.17
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

NFkB-p65-Rel(RHD)/LPS-exp/Homer

Match rank:  1
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTTCC
GGGAATTTCC
  

MA0107.1_RELA

Match rank:  2
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-GGAATTTCC
GGGAATTTCC
  

TF65_f2_HM09

Match rank:  3
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-GGAATTTCC-
GGGAATTTCCC
  

RELB_si_HM09

Match rank:  4
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--GGAATTTCC-
GGGGGATTTCCC
  

MA0101.1_REL

Match rank:  5
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GGAATTTCC
GGGGATTTCC