Detailed information for motif1

P-value:1e-75
ln P-value:-1.745e+02
Information content per bp:1.636
Number of target sequences with motif:189.0
Percentage of target sequences with motif:37.28%
Number of background sequences with motif:3886.8
Percentage of background sequences with motif:  7.89%
Average position of motif in targets:198.5 +/- 64.6bp
Average position of motif in background:202.7 +/- 113.1bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.17
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer

Match rank:  1
Score:0.99
Offset:0
Orientation:reverse strand
Alignment:VVTGASTCAT
DVTGASTCAB
  

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer

Match rank:  2
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-VVTGASTCAT-
NNATGAGTCATN
  

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  3
Score:0.97
Offset:1
Orientation:forward strand
Alignment:VVTGASTCAT-
-ATGACTCATC
  

MA0099.1_Fos

Match rank:  4
Score:0.96
Offset:2
Orientation:reverse strand
Alignment:VVTGASTCAT
--TGACTCAC
  

FOS_FOS{B,L1}_JUN{B,D}.p2.SwissRegulon.nucfreq

Match rank:  5
Score:0.95
Offset:2
Orientation:reverse strand
Alignment:VVTGASTCAT
--TGACTCAC