Detailed information for motif2

P-value:1e-25
ln P-value:-5.986e+01
Information content per bp:1.740
Number of target sequences with motif:48.0
Percentage of target sequences with motif:5.87%
Number of background sequences with motif:373.5
Percentage of background sequences with motif:  0.77%
Average position of motif in targets:209.0 +/- 75.5bp
Average position of motif in background:190.3 +/- 115.7bp
Strand bias (log2 ratio + to - strand density):1.0
Multiplicity (# of sites on avg that occur together):  1.04
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq/Homer

Match rank:  1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:RTCATGACTAA----
ACCGTGACTAATTNN
  

MA0099.1_Fos

Match rank:  2
Score:0.75
Offset:3
Orientation:forward strand
Alignment:RTCATGACTAA
---GTGAGTCA
  

HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer

Match rank:  3
Score:0.75
Offset:3
Orientation:forward strand
Alignment:RTCATGACTAA--
---VTGASTCABH
  

MAFG_si_HM09

Match rank:  4
Score:0.73
Offset:2
Orientation:forward strand
Alignment:RTCATGACTAA
--CATGACT--
  

NF2L1_f1_HM09

Match rank:  5
Score:0.72
Offset:2
Orientation:forward strand
Alignment:RTCATGACTAA
--AATGACT--