Detailed information for motif6

P-value:1e-15
ln P-value:-3.509e+01
Information content per bp:1.784
Number of target sequences with motif:29.0
Percentage of target sequences with motif:6.71%
Number of background sequences with motif:462.2
Percentage of background sequences with motif:  0.95%
Average position of motif in targets:185.9 +/- 86.9bp
Average position of motif in background:200.1 +/- 111.3bp
Strand bias (log2 ratio + to - strand density):-0.4
Multiplicity (# of sites on avg that occur together):  1.00
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

NFE2L2.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---CTTAGTCACG
CTGCTGAGTCATG
  

PAX2.p2.SwissRegulon.nucfreq

Match rank:  2
Score:0.78
Offset:3
Orientation:forward strand
Alignment:CTTAGTCACG-
---NGTCACGN
  

MA0067.1_Pax2

Match rank:  3
Score:0.77
Offset:3
Orientation:forward strand
Alignment:CTTAGTCACG-
---AGTCACGC
  

NF2L2_si_HM09

Match rank:  4
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CTTAGTCACG
TGCTGAGTCATG
  

MAFG_si_HM09

Match rank:  5
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:CTTAGTCACG
---AGTCATN