Detailed information for motif1

P-value:1e-37
ln P-value:-8.646e+01
Information content per bp:1.600
Number of target sequences with motif:144.0
Percentage of target sequences with motif:33.33%
Number of background sequences with motif:5036.3
Percentage of background sequences with motif:  10.31%
Average position of motif in targets:207.3 +/- 84.1bp
Average position of motif in background:198.4 +/- 120.7bp
Strand bias (log2 ratio + to - strand density):0.1
Multiplicity (# of sites on avg that occur together):  1.24
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

JUN_f1_HM09

Match rank:  1
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:VTGACTCAT
NTGACTCAN
  

FOSL2_f1_HM09

Match rank:  2
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:VTGACTCAT--
ATGACTCATCC
  

JUND_f1_HM09

Match rank:  3
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-VTGACTCAT-
GATGACTCATC
  

JUNB_f1_HM09

Match rank:  4
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:VTGACTCAT-
NTGACTCANN
  

BATF_si_HM09

Match rank:  5
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-VTGACTCAT
NATGACTCAT