Detailed information for motif28

P-value:1e-19
ln P-value:-4.458e+01
Information content per bp:1.649
Number of target sequences with motif:651.0
Percentage of target sequences with motif:34.44%
Number of background sequences with motif:11948.3
Percentage of background sequences with motif:  25.03%
Average position of motif in targets:197.3 +/- 108.4bp
Average position of motif in background:199.8 +/- 122.8bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.18
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0295.1_FHL1

Match rank:  1
Score:0.83
Offset:0
Orientation:forward strand
Alignment:VACGCAA-
GACGCAAA
  

AHR_si_HM09

Match rank:  2
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-VACGCAA-
GCACGCAAN
  

MA0416.1_YAP3

Match rank:  3
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:VACGCAA-
TACGTAAT
  

AHR_ARNT_ARNT2.p2.SwissRegulon.nucfreq

Match rank:  4
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:VACGCAA
CACGCA-
  

MA0006.1_Arnt::Ahr

Match rank:  5
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:VACGCAA
CACGCA-