Detailed information for motif9

P-value:1e-15
ln P-value:-3.568e+01
Information content per bp:1.779
Number of target sequences with motif:242.0
Percentage of target sequences with motif:31.76%
Number of background sequences with motif:9332.4
Percentage of background sequences with motif:  19.37%
Average position of motif in targets:204.7 +/- 110.9bp
Average position of motif in background:199.2 +/- 126.2bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.14
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0242.1_run::Bgb

Match rank:  1
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--GCGGTTT
TTGCGGTTA
  

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq/Homer

Match rank:  2
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---GCGGTTT
NNTGTGGTTT
  

RUNX(Runt)/HPC7-Runx1-ChIP-Seq/Homer

Match rank:  3
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GCGGTTT-
CTGTGGTTTN
  

MA0260.1_che-1

Match rank:  4
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GCGGTTT-
--GGTTTC
  

IRF4(IRF)/GM12878-IRF4-ChIP-Seq/Homer

Match rank:  5
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GCGGTTT----
-TGGTTTCAGT