Detailed information for motif6

P-value:1e-15
ln P-value:-3.670e+01
Information content per bp:1.674
Number of target sequences with motif:184.0
Percentage of target sequences with motif:24.15%
Number of background sequences with motif:6312.3
Percentage of background sequences with motif:  13.10%
Average position of motif in targets:209.9 +/- 92.6bp
Average position of motif in background:192.6 +/- 117.3bp
Strand bias (log2 ratio + to - strand density):-0.2
Multiplicity (# of sites on avg that occur together):  1.11
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

POL004.1_CCAAT-box

Match rank:  1
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--YAGCCAATS-
ACTAGCCAATCA
  

CEBPZ_si_HM09

Match rank:  2
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:YAGCCAATS---
-AGCCAATCAGN
  

NFYC_f1_HM09

Match rank:  3
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:YAGCCAATS-----
CAGCCAATCAGCGC
  

NFYB_f1_HM09

Match rank:  4
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:YAGCCAATS----
CAGCCAATCAGAG
  

MA0060.1_NFYA

Match rank:  5
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--YAGCCAATS-----
CTCAGCCAATCAGCGC