Detailed information for motif4

P-value:1e-18
ln P-value:-4.243e+01
Information content per bp:1.613
Number of target sequences with motif:239.0
Percentage of target sequences with motif:31.36%
Number of background sequences with motif:8678.6
Percentage of background sequences with motif:  18.01%
Average position of motif in targets:206.5 +/- 112.6bp
Average position of motif in background:201.6 +/- 119.5bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.19
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match rank:  1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGCCTGCYTTT
TWGTCTGV----
  

POL009.1_DCE_S_II

Match rank:  2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGCCTGCYTTT
--GCTGTG---
  

MA0385.1_SOK2

Match rank:  3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGCCTGCYTTT
NNCCTGCAGGT
  

SMAD3_f1_HM09

Match rank:  4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCCTGCYTTT
GTGTCTGGCC--
  

SMAD1..7,9.p2.SwissRegulon.nucfreq

Match rank:  5
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------AGCCTGCYTTT
GNNGGGCAGACAGCC---