Detailed information for motif3

P-value:1e-19
ln P-value:-4.391e+01
Information content per bp:1.898
Number of target sequences with motif:369.0
Percentage of target sequences with motif:48.43%
Number of background sequences with motif:15689.0
Percentage of background sequences with motif:  32.56%
Average position of motif in targets:202.7 +/- 100.5bp
Average position of motif in background:194.5 +/- 123.3bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.69
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

KLF4_f2_HM09

Match rank:  1
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-GGGCGGGG-
TGGGCGGGGC
  

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match rank:  2
Score:0.93
Offset:0
Orientation:forward strand
Alignment:GGGCGGGG
GGGGGGGG
  

MA0039.2_Klf4

Match rank:  3
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-GGGCGGGG-
TGGGTGGGGC
  

KLF4.p3.SwissRegulon.nucfreq

Match rank:  4
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-GGGCGGGG-
TGGGTGGGGC
  

SP1_f1_HM09

Match rank:  5
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--GGGCGGGG-
GGGGGCGGGGC