Detailed information for motif1

P-value:1e-86
ln P-value:-1.985e+02
Information content per bp:1.694
Number of target sequences with motif:166.0
Percentage of target sequences with motif:21.78%
Number of background sequences with motif:1501.2
Percentage of background sequences with motif:  3.12%
Average position of motif in targets:204.3 +/- 69.5bp
Average position of motif in background:200.4 +/- 113.5bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.10
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer

Match rank:  1
Score:0.98
Offset:-2
Orientation:reverse strand
Alignment:--VTGASTCAYNVN
NNATGAGTCATN--
  

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  2
Score:0.98
Offset:-1
Orientation:reverse strand
Alignment:-VTGASTCAYNVN
GATGAGTCAT---
  

HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer

Match rank:  3
Score:0.97
Offset:0
Orientation:forward strand
Alignment:VTGASTCAYNVN
VTGASTCABH--
  

MA0303.1_GCN4

Match rank:  4
Score:0.96
Offset:-6
Orientation:forward strand
Alignment:------VTGASTCAYNVN---
CAAGGGATGAGTCATACTTCA
  

FOS_FOS{B,L1}_JUN{B,D}.p2.SwissRegulon.nucfreq

Match rank:  5
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:VTGASTCAYNVN
-TGACTCAC---