Detailed information for motif6

P-value:1e-16
ln P-value:-3.827e+01
Information content per bp:1.647
Number of target sequences with motif:201.0
Percentage of target sequences with motif:28.67%
Number of background sequences with motif:7869.1
Percentage of background sequences with motif:  16.00%
Average position of motif in targets:216.2 +/- 95.4bp
Average position of motif in background:199.6 +/- 114.9bp
Strand bias (log2 ratio + to - strand density):0.4
Multiplicity (# of sites on avg that occur together):  1.20
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

TF65_f2_HM09

Match rank:  1
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:GGGAAATTCC-
GGGAAATTCCC
  

NFkB-p65-Rel(RHD)/LPS-exp/Homer

Match rank:  2
Score:0.91
Offset:1
Orientation:forward strand
Alignment:GGGAAATTCC-
-GGAAATTCCC
  

MA0107.1_RELA

Match rank:  3
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:GGGAAATTCC-
-GGAAATTCCC
  

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq/Homer

Match rank:  4
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GGGAAATTCC--
GGGAAATCCCCN
  

NFKB2_f1_HM09

Match rank:  5
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-GGGAAATTCC
AGGGAGATTCC