Detailed information for motif1

P-value:1e-87
ln P-value:-2.021e+02
Information content per bp:1.697
Number of target sequences with motif:219.0
Percentage of target sequences with motif:31.24%
Number of background sequences with motif:3144.0
Percentage of background sequences with motif:  6.39%
Average position of motif in targets:204.1 +/- 66.4bp
Average position of motif in background:198.4 +/- 116.6bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.13
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer

Match rank:  1
Score:0.98
Offset:-1
Orientation:reverse strand
Alignment:-VTGASTCATB
DVTGASTCAB-
  

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer

Match rank:  2
Score:0.98
Offset:-2
Orientation:reverse strand
Alignment:--VTGASTCATB
NNATGAGTCATN
  

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  3
Score:0.98
Offset:0
Orientation:forward strand
Alignment:VTGASTCATB
ATGACTCATC
  

MA0099.1_Fos

Match rank:  4
Score:0.94
Offset:0
Orientation:forward strand
Alignment:VTGASTCATB
GTGAGTCA--
  

FOS_FOS{B,L1}_JUN{B,D}.p2.SwissRegulon.nucfreq

Match rank:  5
Score:0.94
Offset:0
Orientation:forward strand
Alignment:VTGASTCATB
GTGAGTCA--