Detailed information for motif35

P-value:1e-18
ln P-value:-4.345e+01
Information content per bp:1.714
Number of target sequences with motif:154.0
Percentage of target sequences with motif:5.57%
Number of background sequences with motif:1165.6
Percentage of background sequences with motif:  2.48%
Average position of motif in targets:191.0 +/- 112.0bp
Average position of motif in background:193.9 +/- 114.2bp
Strand bias (log2 ratio + to - strand density):0.2
Multiplicity (# of sites on avg that occur together):  1.06
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

HEB?/mES-Nanog-ChIP-Seq/Homer

Match rank:  1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CAGCCCWGCCRGG--
---CACAGCAGGGGG
  

PB0206.1_Zic2_2

Match rank:  2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGCCCWGCCRGG--
CCACACAGCAGGAGA
  

PB0205.1_Zic1_2

Match rank:  3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAGCCCWGCCRGG--
CCACACAGCAGGAGA
  

PB0207.1_Zic3_2

Match rank:  4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAGCCCWGCCRGG--
GAGCACAGCAGGACA
  

PB0199.1_Zfp161_2

Match rank:  5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAGCCCWGCCRGG-
NNGCNCTGCGCGGC