Detailed information for motif27

P-value:1e-20
ln P-value:-4.748e+01
Information content per bp:1.628
Number of target sequences with motif:152.0
Percentage of target sequences with motif:5.50%
Number of background sequences with motif:1092.3
Percentage of background sequences with motif:  2.33%
Average position of motif in targets:208.4 +/- 91.3bp
Average position of motif in background:195.6 +/- 114.9bp
Strand bias (log2 ratio + to - strand density):0.4
Multiplicity (# of sites on avg that occur together):  1.05
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

PAX2_si_HM09

Match rank:  1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GTCATGCGT
GTCATGC--
  

PL0008.1_hlh-29

Match rank:  2
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---GTCATGCGT-----
TNNGCCACGCGTGNNNN
  

MA0089.1_NFE2L1::MafG

Match rank:  3
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GTCATGCGT
GTCATN---
  

NFE2L1.p2.SwissRegulon.nucfreq

Match rank:  4
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GTCATGCGT
GTCATC---
  

MAFG_si_HM09

Match rank:  5
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GTCATGCGT
AGTCATN---