Detailed information for motif16

P-value:1e-33
ln P-value:-7.764e+01
Information content per bp:1.528
Number of target sequences with motif:211.0
Percentage of target sequences with motif:7.64%
Number of background sequences with motif:1384.3
Percentage of background sequences with motif:  2.95%
Average position of motif in targets:199.0 +/- 83.7bp
Average position of motif in background:197.8 +/- 113.8bp
Strand bias (log2 ratio + to - strand density):0.1
Multiplicity (# of sites on avg that occur together):  1.08
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq/Homer

Match rank:  1
Score:0.94
Offset:0
Orientation:forward strand
Alignment:NGGGGAWTTCCC
NGGGGATTTCCC
  

NFKB1_f1_HM09

Match rank:  2
Score:0.91
Offset:1
Orientation:forward strand
Alignment:NGGGGAWTTCCC
-GGGGAATCCCC
  

MA0061.1_NF-kappaB

Match rank:  3
Score:0.90
Offset:2
Orientation:reverse strand
Alignment:NGGGGAWTTCCC
--GGAAATTCCC
  

MA0105.1_NFKB1

Match rank:  4
Score:0.90
Offset:1
Orientation:forward strand
Alignment:NGGGGAWTTCCC
-GGGGATTCCCC
  

REL_do_HM09

Match rank:  5
Score:0.88
Offset:0
Orientation:forward strand
Alignment:NGGGGAWTTCCC
TGGGGATTTCCC