Detailed information for motif38

P-value:1e-16
ln P-value:-3.752e+01
Information content per bp:1.637
Number of target sequences with motif:2589.0
Percentage of target sequences with motif:67.37%
Number of background sequences with motif:27545.9
Percentage of background sequences with motif:  60.90%
Average position of motif in targets:199.5 +/- 109.8bp
Average position of motif in background:199.4 +/- 118.6bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.49
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq/Homer

Match rank:  1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTGACAMGTGA
NTGATTGACAGN---
  

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match rank:  2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGAGTGACAMGTGA
TGAGTGACAGSC--
  

MA0255.1_z

Match rank:  3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGAGTGACAMGTGA
TTGAGTGATT-----
  

PAX2_f1_HM09

Match rank:  4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGAGTGACAMGTGA--
GTTCAGTCATGCGTGACA
  

MA0409.1_TYE7

Match rank:  5
Score:0.63
Offset:7
Orientation:forward strand
Alignment:TGAGTGACAMGTGA
-------CACGTGA