Detailed information for motif36

P-value:1e-17
ln P-value:-4.098e+01
Information content per bp:1.746
Number of target sequences with motif:522.0
Percentage of target sequences with motif:13.58%
Number of background sequences with motif:4185.4
Percentage of background sequences with motif:  9.25%
Average position of motif in targets:191.7 +/- 112.6bp
Average position of motif in background:198.0 +/- 124.0bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.09
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

FOXN1.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AAAGACGC---
AGNGACGCTNT
  

MA0271.1_ARG80

Match rank:  2
Score:0.75
Offset:2
Orientation:forward strand
Alignment:AAAGACGC
--AGACGC
  

MA0295.1_FHL1

Match rank:  3
Score:0.72
Offset:3
Orientation:forward strand
Alignment:AAAGACGC---
---GACGCAAA
  

MA0006.1_Arnt::Ahr

Match rank:  4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AAAGACGC-
---CACGCA
  

AHR_ARNT_ARNT2.p2.SwissRegulon.nucfreq

Match rank:  5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AAAGACGC-
---CACGCA