Detailed information for motif31

P-value:1e-20
ln P-value:-4.659e+01
Information content per bp:1.766
Number of target sequences with motif:2070.0
Percentage of target sequences with motif:53.86%
Number of background sequences with motif:20962.9
Percentage of background sequences with motif:  46.34%
Average position of motif in targets:201.9 +/- 111.9bp
Average position of motif in background:201.0 +/- 122.0bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.41
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

PAX5_si_HM09

Match rank:  1
Score:0.84
Offset:0
Orientation:forward strand
Alignment:GTCTGAG-
GGCTGAGG
  

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match rank:  2
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GTCTGAG
TWGTCTGV-
  

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match rank:  3
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GTCTGAG
CTGTCTGG-
  

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match rank:  4
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GTCTGAG
VBSYGTCTGG-
  

SMAD3_f1_HM09

Match rank:  5
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GTCTGAG-
GTGTCTGGCC