Detailed information for motif27

P-value:1e-22
ln P-value:-5.102e+01
Information content per bp:1.671
Number of target sequences with motif:361.0
Percentage of target sequences with motif:9.39%
Number of background sequences with motif:2468.3
Percentage of background sequences with motif:  5.46%
Average position of motif in targets:206.7 +/- 95.6bp
Average position of motif in background:195.6 +/- 117.8bp
Strand bias (log2 ratio + to - strand density):0.1
Multiplicity (# of sites on avg that occur together):  1.07
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

POL003.1_GC-box

Match rank:  1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:AAGCCCCGCCC---
NAGCCCCGCCCCCN
  

SP1.p2.SwissRegulon.nucfreq

Match rank:  2
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:AAGCCCCGCCC---
CGGCCCCGCCCCCC
  

SP1_f1_HM09

Match rank:  3
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:AAGCCCCGCCC--
--GCCCCGCCCCC
  

KLF4_f2_HM09

Match rank:  4
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:AAGCCCCGCCC-
--GCCCCGCCCN
  

KLF4.p3.SwissRegulon.nucfreq

Match rank:  5
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:AAGCCCCGCCC-
--GCCCCACCCA