Detailed information for motif23

P-value:1e-26
ln P-value:-6.000e+01
Information content per bp:1.668
Number of target sequences with motif:246.0
Percentage of target sequences with motif:6.40%
Number of background sequences with motif:1368.7
Percentage of background sequences with motif:  3.03%
Average position of motif in targets:211.1 +/- 104.3bp
Average position of motif in background:198.9 +/- 122.0bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.04
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

STAT5(Stat)/mCD4+-Stat5a|b-ChIP-Seq/Homer

Match rank:  1
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-DTTCGVAGAA-
NTTTCTNAGAAA
  

STA5A_do_HM09

Match rank:  2
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-DTTCGVAGAA-
AATTCCTGGAAA
  

STA5B_f1_HM09

Match rank:  3
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-DTTCGVAGAA--
AATTCCNAGAAAN
  

STAT4_si_HM09

Match rank:  4
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:DTTCGVAGAA---
TTTCCCAGAAAAG
  

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq/Homer

Match rank:  5
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-DTTCGVAGAA---
ATTTCCNGGAAATN