Detailed information for motif16

P-value:1e-36
ln P-value:-8.427e+01
Information content per bp:1.832
Number of target sequences with motif:858.0
Percentage of target sequences with motif:22.33%
Number of background sequences with motif:6611.2
Percentage of background sequences with motif:  14.62%
Average position of motif in targets:205.9 +/- 103.7bp
Average position of motif in background:197.6 +/- 121.4bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.19
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0365.1_RFX1

Match rank:  1
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-GTTGCTAT
GGTTGCCA-
  

PB0056.1_Rfxdc2_1

Match rank:  2
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---GTTGCTAT----
NCCGTTGCTANGNGN
  

PB0055.1_Rfx4_1

Match rank:  3
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---GTTGCTAT----
NNCGTTGCTATGGNN
  

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match rank:  4
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--GTTGCTAT--
CTGTTGCTAGGS
  

PB0054.1_Rfx3_1

Match rank:  5
Score:0.86
Offset:-7
Orientation:reverse strand
Alignment:-------GTTGCTAT--------
NTNNNNNGTTGCTANGGNNCANA