Detailed information for motif8

P-value:1e-32
ln P-value:-7.579e+01
Information content per bp:1.703
Number of target sequences with motif:500.0
Percentage of target sequences with motif:28.72%
Number of background sequences with motif:8159.1
Percentage of background sequences with motif:  17.04%
Average position of motif in targets:202.7 +/- 109.2bp
Average position of motif in background:200.4 +/- 118.0bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.19
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

SOX13_f1_HM09

Match rank:  1
Score:0.91
Offset:1
Orientation:forward strand
Alignment:AAMACAATG
-GAACAATG
  

SOX9_f1_HM09

Match rank:  2
Score:0.91
Offset:0
Orientation:forward strand
Alignment:AAMACAATG--
AGAACAATGGG
  

MA0078.1_Sox17

Match rank:  3
Score:0.89
Offset:2
Orientation:reverse strand
Alignment:AAMACAATG--
--GACAATGNN
  

SOX2.p2.SwissRegulon.nucfreq

Match rank:  4
Score:0.89
Offset:2
Orientation:forward strand
Alignment:AAMACAATG
--AACAATG
  

MA0077.1_SOX9

Match rank:  5
Score:0.89
Offset:1
Orientation:forward strand
Alignment:AAMACAATG-
-GAACAATGG