Detailed information for motif23

P-value:1e-17
ln P-value:-3.971e+01
Information content per bp:1.681
Number of target sequences with motif:165.0
Percentage of target sequences with motif:9.48%
Number of background sequences with motif:2194.6
Percentage of background sequences with motif:  4.58%
Average position of motif in targets:207.6 +/- 110.9bp
Average position of motif in background:198.1 +/- 116.9bp
Strand bias (log2 ratio + to - strand density):0.5
Multiplicity (# of sites on avg that occur together):  1.04
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq/Homer

Match rank:  1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GTTTCCACTCCC
ATTTTCCATT---
  

NFATC1..3.p2.SwissRegulon.nucfreq

Match rank:  2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCCACTCCC
AATTTTCCACTN--
  

MA0081.1_SPIB

Match rank:  3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GTTTCCACTCCC
--TTCCTCT---
  

SPIB.p2.SwissRegulon.nucfreq

Match rank:  4
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GTTTCCACTCCC
--TTCCTCT---
  

MA0152.1_NFATC2

Match rank:  5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GTTTCCACTCCC
TTTTCCA-----