Detailed information for motif54

P-value:1e-16
ln P-value:-3.729e+01
Information content per bp:1.653
Number of target sequences with motif:921.0
Percentage of target sequences with motif:5.81%
Number of background sequences with motif:1431.8
Percentage of background sequences with motif:  4.40%
Average position of motif in targets:322.6 +/- 252.3bp
Average position of motif in background:273.7 +/- 211.7bp
Strand bias (log2 ratio + to - strand density):0.2
Multiplicity (# of sites on avg that occur together):  1.04
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

PO6F1_f1_HM09

Match rank:  1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---AATTTAGGCG
CATAATTTATGCA
  

ENCODE UW.Motif.0638

Match rank:  2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AATTTAGGCG
CANTTTNGGG-
  

PO3F2_si_HM09

Match rank:  3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AATTTAGGCG
ATTATTTATG--
  

MA0372.1_RPH1

Match rank:  4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AATTTAGGCG-
---TTAGGGGT
  

PB0171.1_Sox18_2

Match rank:  5
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------AATTTAGGCG
GGACTGAATTCATGCC