Detailed information for motif36

P-value:1e-38
ln P-value:-8.783e+01
Information content per bp:1.664
Number of target sequences with motif:1997.0
Percentage of target sequences with motif:12.61%
Number of background sequences with motif:3073.5
Percentage of background sequences with motif:  9.45%
Average position of motif in targets:330.2 +/- 245.4bp
Average position of motif in background:272.8 +/- 209.3bp
Strand bias (log2 ratio + to - strand density):0.1
Multiplicity (# of sites on avg that occur together):  1.07
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

ENCODE UW.Motif.0087

Match rank:  1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GNCGCTCTA
-GCCCTCTA
  

ENCODE UW.Motif.0478_novel

Match rank:  2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GNCGCTCTA----
GNNGCTCTNNNTG
  

MA0301.1_GAT3

Match rank:  3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GNCGCTCTA--
--AGATCTACA
  

MA0389.1_SRD1

Match rank:  4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GNCGCTCTA-
--AGATCTAC
  

PH0158.1_Rhox11_2

Match rank:  5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GNCGCTCTA------
AGGACGCTGTAAAGGGA