Detailed information for motif27

P-value:1e-46
ln P-value:-1.068e+02
Information content per bp:1.644
Number of target sequences with motif:3563.0
Percentage of target sequences with motif:22.49%
Number of background sequences with motif:5846.0
Percentage of background sequences with motif:  17.97%
Average position of motif in targets:326.3 +/- 240.1bp
Average position of motif in background:289.7 +/- 209.9bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.14
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

ENCODE UW.Motif.0021_novel

Match rank:  1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTCAGTCGCCG
--CAGCCTCC-
  

ENCODE UW.Motif.0173_novel

Match rank:  2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTCAGTCGCCG---
-TNAGTNNCTGNNA
  

POL002.1_INR

Match rank:  3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTCAGTCGCCG
-TCAGTCTT--
  

PAX5_si_HM09

Match rank:  4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTCAGTCGCCG
CCTCAGCC----
  

MA0412.1_UME6

Match rank:  5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTCAGTCGCCG-
AATTAGCCGCCGA