Detailed information for motif1

P-value:1e-418
ln P-value:-9.625e+02
Information content per bp:1.694
Number of target sequences with motif:7274.0
Percentage of target sequences with motif:45.92%
Number of background sequences with motif:9567.8
Percentage of background sequences with motif:  29.41%
Average position of motif in targets:300.3 +/- 189.9bp
Average position of motif in background:246.2 +/- 183.0bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.67
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

SP1.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:NRGCCCCGCCCCC-
CGGCCCCGCCCCCC
  

POL003.1_GC-box

Match rank:  2
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:NRGCCCCGCCCCC-
NAGCCCCGCCCCCN
  

SP1_f1_HM09

Match rank:  3
Score:0.95
Offset:2
Orientation:reverse strand
Alignment:NRGCCCCGCCCCC
--GCCCCGCCCCC
  

PB0039.1_Klf7_1

Match rank:  4
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-NRGCCCCGCCCCC--
TCGACCCCGCCCCTAT
  

SP1_f2_HM09

Match rank:  5
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-NRGCCCCGCCCCC-----
CNGGCCCCGCCCCCNCCCC