Detailed information for motif39

P-value:1e-18
ln P-value:-4.249e+01
Information content per bp:1.520
Number of target sequences with motif:8507.0
Percentage of target sequences with motif:17.35%
Number of background sequences with motif:7771.0
Percentage of background sequences with motif:  15.87%
Average position of motif in targets:214.7 +/- 139.5bp
Average position of motif in background:303.1 +/- 53.2bp
Strand bias (log2 ratio + to - strand density):-0.6
Multiplicity (# of sites on avg that occur together):  1.00
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MF0007.1_bHLH(zip)_class

Match rank:  1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACTTGRYCYTBDG
CACGTGNT------
  

bHLH_family.p2.SwissRegulon.nucfreq

Match rank:  2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACTTGRYCYTBDG
CACGTGGT------
  

ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2.SwissRegulon.nucfreq

Match rank:  3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CACTTGRYCYTBDG
GCCACGTGNCC-----
  

USF1(HLH)/GM12878-Usf1-ChIP-Seq/Homer

Match rank:  4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CACTTGRYCYTBDG
TCACGTGACC-----
  

MA0058.1_MAX

Match rank:  5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CACTTGRYCYTBDG
NCACGTGGTN-----