Detailed information for motif40

P-value:1e-55
ln P-value:-1.284e+02
Information content per bp:1.675
Number of target sequences with motif:1345.0
Percentage of target sequences with motif:3.96%
Number of background sequences with motif:850.3
Percentage of background sequences with motif:  2.51%
Average position of motif in targets:200.8 +/- 106.7bp
Average position of motif in background:195.7 +/- 112.3bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.03
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0052.1_MEF2A

Match rank:  1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:CTATTTATAGC
CTATTTATAG-
  

MEF2C_f1_HM09

Match rank:  2
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTATAGC-
NCTATTTATAGAA
  

MEF2A_f1_HM09

Match rank:  3
Score:0.93
Offset:-3
Orientation:forward strand
Alignment:---CTATTTATAGC
GTTCTATTTATAGC
  

MEF2{A,B,C,D}.p2.SwissRegulon.nucfreq

Match rank:  4
Score:0.92
Offset:0
Orientation:forward strand
Alignment:CTATTTATAGC
CTATTTTTAG-
  

MEF2D_f1_HM09

Match rank:  5
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-CTATTTATAGC
GCTATTTTTAGC