Detailed information for motif30

P-value:1e-84
ln P-value:-1.935e+02
Information content per bp:1.629
Number of target sequences with motif:4462.0
Percentage of target sequences with motif:13.14%
Number of background sequences with motif:3337.2
Percentage of background sequences with motif:  9.85%
Average position of motif in targets:199.6 +/- 106.9bp
Average position of motif in background:200.7 +/- 114.3bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.07
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

SUH_f1_HM09

Match rank:  1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CGTGGTAAC
CGTGGGAAA
  

MA0085.1_Su(H)

Match rank:  2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CGTGGTAAC------
CTGTGGGAAACGAGAT
  

MA0365.1_RFX1

Match rank:  3
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CGTGGTAAC-
--TAGCAACC
  

RBPJ.p2.SwissRegulon.nucfreq

Match rank:  4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CGTGGTAAC------
NTGTGGGAAACGNNNT
  

RFX3_f1_HM09

Match rank:  5
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CGTGGTAAC-
TTACCATGGCAACN